Mojtaba Tefagh – Publications
- GEM-based computational modeling for exploring metabolic interactions in a microbial community
S. Mirzaei and M. Tefagh, PLOS Computational Biology, 2024.
- Improving Grading Fairness and Transparency with Decentralized Collaborative Peer Assessment
S. Alipour, S. Elahimanesh, S. Jahanzad, I. Mohammadi, P. Morassafar, S.P. Neshaei, and M. Tefagh, CSCW1, 2024.
- Built-in wavelet-induced smoothness to reduce plan complexity in intensity modulated radiation therapy (IMRT)
M. Tefagh and M. Zarepisheh, Physics in Medicine & Biology, 2023.
- Atomic bonded cross-chain debt
M. Tefagh, F. Bagheri, A. Khajehpour, and M. Abdi, ICBTA, 2020.
- SWIFTCORE: a tool for the context-specific reconstruction of genome-scale metabolic networks
M. Tefagh and S.P. Boyd, BMC Bioinformatics, 2020.
- Metabolic network reductions
M. Tefagh and S.P. Boyd, bioRxiv, 2019.
- Quantitative flux coupling analysis
M. Tefagh and S.P. Boyd, J. Math. Biol., 2019.
- A mathematical approach to emergent properties of metabolic networks: Partial coupling relations, hyperarcs and flux ratios
S.A. Marashi and M. Tefagh, J. Theor. Biol., 2014.
Dissertation
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Applications of convex optimization in metabolic network analysis |