Sparse Quantitative Flux Coupling Analysis
certificates, blocked, fctable = QFCA(S, rev)
S: the associated sparse stoichiometric matrix
rev: the boolean vector with trues corresponding to the reversible reactions
certificates: the fictitious metabolites for the sparse positive certificates
blocked: the boolean vector with trues corresponding to the blocked reactions
fctable: the resulting flux coupling matrix
To get started, first run
import Pkg; Pkg.add("sparseQFCA") to install the sparseQFCA package, and then see this Jupyter notebook for a demonstration on how to use it.
sparseQFCA is distributed under the GNU General Public License v3.0.